RRC ID |
34132
|
著者 |
Chiu HH, Rogozin DY, Huang SP, Degermendzhy AG, Shieh WY, Tang SL.
|
タイトル |
Aliidiomarina shirensis sp. nov., a halophilic bacterium isolated from Shira Lake in Khakasia, southern Siberia, and a proposal to transfer Idiomarina maris to the genus Aliidiomarina.
|
ジャーナル |
Int J Syst Evol Microbiol
|
Abstract |
Strain AIS(T), an aerobic halophilic, Gram-reaction-negative, heterotrophic bacterium isolated from the water of Shira Lake in Khakasia, southern Siberia, was characterized using a polyphasic approach. Our analysis of the 16S rRNA gene sequences showed that 'Aliidiomarina haloalkalitolerans', 'Aliidiomarina sanyensis', Idiomarina maris and AIS(T) formed a distinct lineage. The sequence similarities between AIS(T) and the type strains of species of the genera Idiomarina and Aliidiomarina were 91.6-95.1 % and 94.0-96.9 %, respectively. The major isoprenoid quinone of AIS(T) was ubiquinone 8 (Q-8). Predominant cellular fatty acids were iso-C17 : 0, iso-C15 : 0 and summed feature 9. The genomic DNA G+C content was 45.8 mol%. It is concluded that AIS(T) represents a novel species of the genus Aliidiomarina, and the name Aliidiomarina shirensis sp. nov. is herein proposed for it. The type strain is AIS(T) ( = JCM 17761(T) = BCRC 80327(T)). Based on its fatty acid profile and our phylogenetic analysis, we propose that Idiomarina maris be transferred to the genus Aliidiomarina.
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巻・号 |
64(Pt 4)
|
ページ |
1334-1339
|
公開日 |
2014-4-1
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DOI |
10.1099/ijs.0.057851-0
|
PMID |
24436066
|
MeSH |
Alteromonadaceae / classification*
Bacterial Typing Techniques
Base Composition
DNA, Bacterial / genetics
Fatty Acids / chemistry
Gammaproteobacteria / classification*
Gammaproteobacteria / genetics
Gammaproteobacteria / isolation & purification
Lakes / microbiology*
Molecular Sequence Data
Phospholipids / chemistry
Phylogeny*
RNA, Ribosomal, 16S / genetics
Sequence Analysis, DNA
Siberia
Ubiquinone / chemistry
|
IF |
2.415
|
引用数 |
12
|
WOS 分野
|
MICROBIOLOGY
|
リソース情報 |
一般微生物 |
JCM 17761 |