論文 - 詳細
| RRC ID | 40825 |
|---|---|
| 著者 | Lee LH, Azman AS, Zainal N, Yin WF, Mutalib NA, Chan KG. |
| タイトル | Sinomonas humi sp. nov., an amylolytic actinobacterium isolated from mangrove forest soil. |
| ジャーナル | Int J Syst Evol Microbiol |
| Abstract |
Strain MUSC 117(T) was isolated from mangrove soil of the Tanjung Lumpur forest in Pahang, Malaysia. This bacterium was yellowish-white pigmented, Gram-staining-positive, rod-coccus shaped and non-motile. On the basis of 16S rRNA gene sequence, strain MUSC 117(T) exhibited highest sequence similarity to Sinomonas atrocyanea DSM 20127(T) (98.0 %), Sinomonas albida LC13(T) (97.9 %) and Sinomonas soli CW 59(T) (97.8 %), and lower (<97.6 %) sequence similarity to other species of the genus Sinomonas. DNA-DNA hybridization experiments revealed a low level of DNA-DNA relatedness (less than 27 %) between strain MUSC 117(T) and closely related species. Chemotaxonomically, the peptidoglycan type was A3α, containing the amino acids lysine, serine, glycine, alanine, glutamic acid and muramic acid. The whole-cell sugars detected were rhamnose, ribose, glucose, galactose and a smaller amount of mannose. The polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol and five unidentified glycolipids. The major fatty acids (>10.0 %) of the cell membrane were anteiso-C15 : 0 (39.4 %), C18 : 1ω7c (17.7 %), anteiso-C17 : 0 (17.2 %) and iso-C16 : 0 (11.4 %). The predominant respiratory quinones detected were MK-9(H2) and MK-9. The DNA G+C content was 67.3 mol%. A comparison of BOX-PCR fingerprints indicated that strain MUSC 117(T) represented a unique DNA profile. Results based on a polyphasic approach showed that strain MUSC 117(T) represents a novel species of the genus Sinomonas, for which the name Sinomonas humi sp. nov. is proposed. The type strain of Sinomonas humi sp. nov. is MUSC 117(T) ( = DSM 29362(T) = MCCC 1K00410(T) = NBRC 110653(T)). |
| 巻・号 | 65(Pt 3) |
| ページ | 996-1002 |
| 公開日 | 2015-3-1 |
| DOI | 10.1099/ijs.0.000053 |
| PMID | 25563924 |
| MeSH | Avicennia / microbiology* Bacterial Typing Techniques Base Composition Cell Wall / chemistry DNA, Bacterial / genetics Fatty Acids / chemistry Forests* Glycolipids / chemistry Malaysia Micrococcaceae / classification* Micrococcaceae / genetics Micrococcaceae / isolation & purification Molecular Sequence Data Nucleic Acid Hybridization Peptidoglycan / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Soil Microbiology* |
| IF | 2.415 |
| 引用数 | 7 |
| WOS 分野 | MICROBIOLOGY |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 最多言及媒体 | Wikipedia |
| 各媒体での言及数の合計 | 2 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 3.0 |
| リソース情報 | |
| 一般微生物 | JCM 21830 JCM 16034 |