RRC ID 59871
著者 Kouyama Y, Masuda T, Fujii A, Ogawa Y, Sato K, Tobo T, Wakiyama H, Yoshikawa Y, Noda M, Tsuruda Y, Kuroda Y, Eguchi H, Ishida F, Kudo SE, Mimori K.
タイトル Oncogenic splicing abnormalities induced by DEAD-Box Helicase 56 amplification in colorectal cancer.
ジャーナル Cancer Sci
Abstract Alternative splicing, regulated by DEAD-Box Helicase (DDX) families, plays an important role in cancer. However, the relationship between the DDX family and cancer has not been fully elucidated. In the present study, we identified a candidate oncogene DDX56 on Ch.7p by a bioinformatics approach using The Cancer Genome Atlas (TCGA) dataset of colorectal cancer (CRC). DDX56 expression was measured by RT-qPCR and immunochemical staining in 108 CRC patients. Clinicopathological and survival analyses were carried out using three CRC datasets. Biological roles of DDX56 were explored by gene set enrichment analysis (GSEA), and cell proliferation in vitro and in vivo, cell cycle assays, and using DDX56-knockdown or overexpressed CRC cells. RNA sequencing was carried out to elucidate the effect of DDX56 on mRNA splicing. We found that DDX56 expression was positively correlated with the amplification of DDX56 and was upregulated in CRC cells. High DDX56 expression was associated with lymphatic invasion and distant metastasis and was an independent poor prognostic factor. In vitro analysis, in vivo analysis and GSEA showed that DDX56 promoted proliferation ability through regulating the cell cycle. DDX56 knockdown reduced intron retention and tumor suppressor WEE1 expression, which functions as a G2-M DNA damage checkpoint. We have identified DDX56 as a novel oncogene and prognostic biomarker of CRC that promotes alternative splicing of WEE1.
巻・号 110(10)
ページ 3132-3144
公開日 2019-10-1
DOI 10.1111/cas.14163
PMID 31390121
PMC PMC6778637
MeSH Aged Animals Cell Cycle Cell Cycle Proteins / genetics* Cell Line, Tumor Chromosomes, Human, Pair 7 / genetics Colorectal Neoplasms / genetics Colorectal Neoplasms / metabolism Colorectal Neoplasms / pathology* DEAD-box RNA Helicases / genetics* DEAD-box RNA Helicases / metabolism* Female Gene Amplification* Gene Expression Regulation, Neoplastic HCT116 Cells Humans Male Mice Middle Aged Neoplasm Invasiveness Neoplasm Staging Neoplasm Transplantation Nuclear Proteins / genetics* Prognosis Protein-Tyrosine Kinases / genetics* RNA Splicing Sequence Analysis, RNA Survival Analysis Up-Regulation*
IF 4.751
引用数 5
リソース情報
ヒト・動物細胞 COLO205(RCB2127) HCT116(RCB2979)