RRC ID 60377
著者 Tohya M, Watanabe S, Teramoto K, Uechi K, Tada T, Kuwahara-Arai K, Kinjo T, Maeda S, Nakasone I, Zaw NN, Mya S, Zan KN, Tin HH, Fujita J, Kirikae T.
タイトル Pseudomonas asiatica sp. nov., isolated from hospitalized patients in Japan and Myanmar.
ジャーナル Int J Syst Evol Microbiol
Abstract A novel Gram-negative, aerobic, rod-shaped, non-spore-forming bacterial strain, RYU5T, was isolated from a stool sample of an inpatient at a hospital in Okinawa, Japan. The optimal growth temperature of RYU5T was 30 °C. Phylogenetic analysis based on the sequences of housekeeping genes, including the 16S rRNA, rpoB, rpoD and gyrB genes, showed that RYU5T was a member of the Pseudomonas putida group and was located close to Pseudomonas monteilii and P. putida. Whole-genome comparisons, using average nucleotide identity and digital DNA-DNA hybridization, confirmed that strain RYU5T should be classified as a novel species of Pseudomonas. Phenotypic characterization tests showed that utilization of d-mannose, d-serine, l-arabinose and d-fructose could distinguish this strain from other related species of the genus Pseudomonas. Based on genetic and phenotypic evidence, strain RYU5T should be classified as a novel species, for which the name Pseudomonas asiatica sp. nov. is proposed. The type strain is RYU5T (=DSM 107182T, =JCM 32716T), with a DNA G+C content of 62.25 mol%.
巻・号 69(5)
ページ 1361-1368
公開日 2019-5-1
DOI 10.1099/ijsem.0.003316
PMID 30810522
MeSH Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Feces / microbiology* Female Genes, Bacterial Humans Japan Male Myanmar Nucleic Acid Hybridization Phylogeny* Pseudomonas / classification* Pseudomonas / isolation & purification RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA
IF 2.166
引用数 7
リソース情報
一般微生物 JCM32716