RRC ID 6426
Author Updike DL, Strome S.
Title A genomewide RNAi screen for genes that affect the stability, distribution and function of P granules in Caenorhabditis elegans.
Journal Genetics
Abstract P granules are non-membrane-bound organelles found in the germ-line cytoplasm throughout Caenorhabditis elegans development. Like their "germ granule" counterparts in other animals, P granules are thought to act as determinants of the identity and special properties of germ cells, properties that include the unique ability to give rise to all tissues of future generations of an organism. Therefore, understanding how P granules work is critical to understanding how cellular immortality and totipotency are retained, gained, and lost. Here we report on a genomewide RNAi screen in C. elegans, which identified 173 genes that affect the stability, localization, and function of P granules. Many of these genes fall into specific classes with shared P-granule phenotypes, allowing us to better understand how cellular processes such as protein degradation, translation, splicing, nuclear transport, and mRNA homeostasis converge on P-granule assembly and function. One of the more striking phenotypes is caused by the depletion of CSR-1, an Argonaute associated with an endogenous siRNA pathway that functions in the germ line. We show that CSR-1 and two other endo-siRNA pathway members, the RNA-dependent RNA polymerase EGO-1 and the helicase DRH-3, act to antagonize RNA and P-granule accumulation in the germ line. Our findings strengthen the emerging view that germ granules are involved in numerous aspects of RNA metabolism, including an endo-siRNA pathway in germ cells.
Volume 183(4)
Pages 1397-419
Published 2009-12-1
DOI 10.1534/genetics.109.110171
PII genetics.109.110171
PMID 19805813
PMC PMC2787428
MeSH Active Transport, Cell Nucleus / genetics Animals Caenorhabditis elegans / cytology* Caenorhabditis elegans / genetics* Caenorhabditis elegans / metabolism Caenorhabditis elegans Proteins / genetics Caenorhabditis elegans Proteins / metabolism Cell Division / genetics Cell Polarity / genetics DEAD-box RNA Helicases / deficiency DEAD-box RNA Helicases / genetics Down-Regulation Genome / genetics Genomics* Germ Cells / cytology Germ Cells / metabolism Homeostasis / genetics MADS Domain Proteins / deficiency MADS Domain Proteins / genetics Phenotype Porosity Proteasome Endopeptidase Complex / deficiency Proteasome Endopeptidase Complex / genetics RNA Interference* RNA Splicing RNA, Messenger / metabolism RNA, Small Interfering / genetics RNA-Binding Proteins / genetics RNA-Binding Proteins / metabolism RNA-Dependent RNA Polymerase / deficiency RNA-Dependent RNA Polymerase / genetics Ribosomes / genetics Ubiquitin / deficiency Ubiquitin / genetics
IF 4.015
Times Cited 57
WOS Category GENETICS & HEREDITY
Resource
C.elegans tm892