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Species Resource Title
C.elegans tm4063 , tm840 Transcriptome profiling of the Caenorhabditis elegans intestine reveals that ELT-2 negatively and positively regulates intestinal gene expression within the context of a gene regulatory network.
C.elegans tm463 CAJAL enables analysis and integration of single-cell morphological data using metric geometry.
Prokaryotes E. coli ME9958 , ME9959 , ME9960 , ME9961 , ME9962 , ME9963 , ME9964 The putrescine Importer PuuP of Escherichia coli K-12.
Clawed frogs / Newts Xenopus tropicalis hoxc12/c13 as key regulators for rebooting the developmental program in Xenopus limb regeneration.
Algae NIES-2238 Improvement of cell growth in green algae Chlamydomonas reinhardtii through co-cultivation with yeast Saccharomyces cerevisiae.
Silkworms p50T Expression of the Wolbachia male-killing factor Oscar impairs dosage compensation in lepidopteran embryos.
Pathogenic bacteria JNBP_30024 V. parahaemolyticus ATCC 17802 Transcriptomic analyses of Vibrio parahaemolyticus under the phenyllactic acid stress.
Pathogenic bacteria V. parahaemolyticus Transcriptome Analysis Reveals the Effect of Low NaCl Concentration on Osmotic Stress and Type III Secretion System in Vibrio parahaemolyticus.
Pathogenic bacteria V. parahaemolyticus Response mechanism of Vibrio parahaemolyticus at high pressure revealed by transcriptomic analysis.
Drosophila D. suzukii (Kyorin, K-AWA036) Evolution of chemosensory tissues and cells across ecologically diverse Drosophilids
Human and Animal Cells Hep G2(RCB1886) Comprehensive Transcriptome Profiling of Antioxidant Activities by Glutathione in Human HepG2 Cells.
Human and Animal Cells HSC-3(RCB1975) Transcriptomic analysis of Porphyromonas gingivalis-infected head and neck cancer cells: Identification of PLAU as a candidate prognostic biomarker.
Drosophila 8501R-2 Molecular traces of Drosophila hemocytes reveal transcriptomic conservation with vertebrate myeloid cells.
Human and Animal Cells HSC-4(RCB1902) , HSC-3(RCB1975) , SAS(RCB1974) , LoVo(RCB1639) , HL60(RCB0041) , MOLT-4(RCB0206) , Hep G2 , K562 Expression of microRNAs in squamous cell carcinoma of human head and neck and the esophagus: miR-205 and miR-21 are specific markers for HNSCC and ESCC.
Arabidopsis / Cultured plant cells, genes sja02900 , sja04400 , sja21500 , sja21600 , sja25100 , sja26400 , sja26800 , sja33200 Natural Root Cellular Variation in Responses to Osmotic Stress in Arabidopsis thaliana Accessions.
Human and Animal Cells HL60(RCB0041) The retinoic acid-responsive proline-rich protein is identified in promyeloleukemic HL-60 cells.
Drosophila 12008R-3 , 14938R-2 , 17131R-1 Transcriptome analysis reveals temporally regulated genetic networks during Drosophila border cell collective migration.
Algae NIES-144 Protist.guru: A Comparative Transcriptomics Database for Protists
Human and Animal Cells OP9(RCB1124) Promotion and maintenance of leukemia by ERG.
General Microbes JCM 5965 Exploring the Functions of Efficient Canonical Denitrifying Bacteria as N2O Sinks: Implications from 15N Tracer and Transcriptome Analyses.