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Species Resource name RRC ID Author Title Journal Published Volume Pages Pubmed ID DOI
DNA material   pENTR4-H1 (RDB04395); CS-RfA-EG (RDB04391); CSI...   47979   Ishibashi M, Neri S, Hashimoto H, Miyashita T, Yoshida T, Nakamura Y, Udagawa H, Kirita K, Matsumoto S, Umemura S, Yoh K, Niho S, Tsuboi M, Masutomi K, Goto K, Ochiai A, Ishii G.   CD200-positive cancer associated fibroblasts augment the sensitivity of Epidermal Growth Factor Receptor mutation-positive lung adenocarcinomas to EGFR Tyrosine kinase inhibitors.   Sci Rep   2017 -4 -22   7   46662   28429795   10.1038/srep46662  
Drosophila     47921   Younus F, Fraser NJ, Coppin CW, Liu JW, Correy GJ, Chertemps T, Pandey G, Maïbèche M, Jackson CJ, Oakeshott JG.   Molecular basis for the behavioral effects of the odorant degrading enzyme Esterase 6 in Drosophila.   Sci Rep   2017 -4 -10   7   46188   28393888   10.1038/srep46188  
Mice   M100366(RBRCGSC0247)   47961   Yamamoto H, Takada T, Yamanashi Y, Ogura M, Masuo Y, Harada-Shiba M, Suzuki H.   VLDL/LDL acts as a drug carrier and regulates the transport and metabolism of drugs in the body.   Sci Rep   2017 -4 -6   7(1)   633   28377633   10.1038/s41598-017-00685-9  
Human and Animal Cells   ACC-MESO-1(RCB2292), ACC-MESO-4(RCB2293)   48066   Tsuji S, Washimi K, Kageyama T, Yamashita M, Yoshihara M, Matsuura R, Yokose T, Kameda Y, Hayashi H, Morohoshi T, Tsuura Y, Yusa T, Sato T, Togayachi A, Narimatsu H, Nagasaki T, Nakamoto K, Moriwaki Y, Misawa H, Hiroshima K, Miyagi Y, Imai K.   HEG1 is a novel mucin-like membrane protein that serves as a diagnostic and therapeutic target for malignant mesothelioma.   Sci Rep   2017 -4 -1   7   45768   28361969   10.1038/srep45768  
Tomato   TOMJPF00001   47770   Ueta R, Abe C, Watanabe T, Sugano SS, Ishihara R, Ezura H, Osakabe Y, Osakabe K.   Rapid breeding of parthenocarpic tomato plants using CRISPR/Cas9.   Sci Rep   2017 -3 -30   7(1)   507   28360425   10.1038/s41598-017-00501-4  
DNA material   Genome Network Project Human cDNA IRAK168O08 (HGY067544...   47938   Kawaguchi K, Uo K, Tanaka T, Komada M.   Tandem UIMs confer Lys48 ubiquitin chain substrate preference to deubiquitinase USP25.   Sci Rep   2017 -3 -23   7   45037   28327663   10.1038/srep45037  
Drosophila   6975R-8   47788   Yun HM, Noh S, Hyun S.   Minocycline treatment suppresses juvenile development and growth by attenuating insulin/TOR signaling in Drosophila animal model.   Sci Rep   2017 -3 -20   7   44724   28317899   10.1038/srep44724  
Human and Animal Cells   RAW 264(RCB0535)   48065   Komiya C, Tanaka M, Tsuchiya K, Shimazu N, Mori K, Furuke S, Miyachi Y, Shiba K, Yamaguchi S, Ikeda K, Ochi K, Nakabayashi K, Hata KI, Itoh M, Suganami T, Ogawa Y.   Antifibrotic effect of pirfenidone in a mouse model of human nonalcoholic steatohepatitis.   Sci Rep   2017 -3 -18   7   44754   28303974   10.1038/srep44754  
Yeast     47683   Xiao Q, Zhang C, Li H, Wei B, Wang Y, Huang H, Li Y, Yu G, Liu H, Zhang J, Liu Y, Hu Y, Huang Y.   Identification and functional analysis of the ICK gene family in maize.   Sci Rep   2017 -3 -06   7   43818   28262730   10.1038/srep43818  
Medaka   Kaga (IB833), hatching enzyme   47776   Seki S, Kusano K, Lee S, Iwasaki Y, Yagisawa M, Ishida M, Hiratsuka T, Sasado T, Naruse K, Yoshizaki G.   Production of the medaka derived from vitrified whole testes by germ cell transplantation.   Sci Rep   2017 -3 -03   7   43185   28256523   10.1038/srep43185  
Mice   MSM/Ms(RBRC00209)   47687   Hirose M, Hasegawa A, Mochida K, Matoba S, Hatanaka Y, Inoue K, Goto T, Kaneda H, Yamada I, Furuse T, Abe K, Uenoyama Y, Tsukamura H, Wakana S, Honda A, Ogura A.   CRISPR/Cas9-mediated genome editing in wild-derived mice: generation of tamed wild-derived strains by mutation of the a (nonagouti) gene.   Sci Rep   2017 -2 -14   7   42476   28195201   10.1038/srep42476  
Drosophila   1063R-2   47647   Richhariya S, Jayakumar S, Abruzzi K, Rosbash M, Hasan G.   A pupal transcriptomic screen identifies Ral as a target of store-operated calcium entry in Drosophila neurons.   Sci Rep   2017 -2 -14   7   42586   28195208   10.1038/srep42586  
Human and Animal Cells   201B7(HPS0063)   47700   Goparaju SK, Kohda K, Ibata K, Soma A, Nakatake Y, Akiyama T, Wakabayashi S, Matsushita M, Sakota M, Kimura H, Yuzaki M, Ko SB, Ko MS.   Rapid differentiation of human pluripotent stem cells into functional neurons by mRNAs encoding transcription factors.   Sci Rep   2017 -2 -13   7   42367   28205555   10.1038/srep42367  
Drosophila   CAS-0004,TBX-0002   47423   Hayashi M, Shinozuka Y, Shigenobu S, Sato M, Sugimoto M, Ito S, Abe K, Kobayashi S.   Conserved role of Ovo in germline development in mouse and Drosophila.   Sci Rep   2017 -1 -06   7   40056   28059165   10.1038/srep40056  
Human and Animal Cells   NOS-1(RCB1032)   47698   Ando T, Kudo Y, Iizuka S, Tsunematsu T, Umehara H, Shrestha M, Matsuo T, Kubo T, Shimose S, Arihiro K, Ogawa I, Ochi M, Takata T.   Ameloblastin induces tumor suppressive phenotype and enhances chemosensitivity to doxorubicin via Src-Stat3 inactivation in osteosarcoma.   Sci Rep   2017 -1 -05   7   40187   28054649   10.1038/srep40187  
Human and Animal Cells   253G1(HPS0002)   47694   Numaga-Tomita T, Kitajima N, Kuroda T, Nishimura A, Miyano K, Yasuda S, Kuwahara K, Sato Y, Ide T, Birnbaumer L, Sumimoto H, Mori Y, Nishida M.   TRPC3-GEF-H1 axis mediates pressure overload-induced cardiac fibrosis.   Sci Rep   2016 -12 -19   6   39383   27991560   10.1038/srep39383  
Japanese macaques     48028   Nishi E, Tsutsui K, Imai H.   High maltose sensitivity of sweet taste receptors in the Japanese macaque (Macaca fuscata).   Sci Rep   2016 -12 -17   6   39352   27982108   10.1038/srep39352  
Wheat   wheat   47967   Saisho D, Takumi S, Matsuoka Y.   Salt tolerance during germination and seedling growth of wild wheat Aegilops tauschii and its impact on the species range expansion.   Sci Rep   2016 -12 -9   6   38554   27929044   10.1038/srep38554  
Medaka   MR(del2) (MT1050), HdrR-II1 (IB178)   47437   Sakamoto T, Yoshiki M, Takahashi H, Yoshida M, Ogino Y, Ikeuchi T, Nakamachi T, Konno N, Matsuda K, Sakamoto H.   Principal function of mineralocorticoid signaling suggested by constitutive knockout of the mineralocorticoid receptor in medaka fish.   Sci Rep   2016 -11 -29   6   37991   27897263   10.1038/srep37991  
Barley   Haruna Nijo, Golden Promise   47253   Hisano H, Sato K.   Genomic regions responsible for amenability to Agrobacterium-mediated transformation in barley.   Sci Rep   2016 -11 -22   6   37505   27874056   10.1038/srep37505  
Drosophila   8376R-1,GFP-IR-2   47272   Shimada N, Inami S, Sato S, Kitamoto T, Sakai T.   Modulation of light-driven arousal by LIM-homeodomain transcription factor Apterous in large PDF-positive lateral neurons of the Drosophila brain.   Sci Rep   2016 -11 -17   6   37255   27853240   10.1038/srep37255  
Yeast   pGK416   48076   Kaishima M, Ishii J, Matsuno T, Fukuda N, Kondo A.   Expression of varied GFPs in Saccharomyces cerevisiae: codon optimization yields stronger than expected expression and fluorescence intensity.   Sci Rep   2016 -10 -27   6   35932   27782154   10.1038/srep35932  
DNA material   Genome Network Project Human cDNA IRAL001I24 (HGY080616...   47497   Yamaguchi A, Takanashi K.   FUS interacts with nuclear matrix-associated protein SAFB1 as well as Matrin3 to regulate splicing and ligand-mediated transcription.   Sci Rep   2016 -10 -12   6   35195   27731383   10.1038/srep35195  
DNA material   CSII-EF-MCS-IRES2-Venus (RDB04384)   47494   Omura H, Oikawa D, Nakane T, Kato M, Ishii R, Ishitani R, Tokunaga F, Nureki O.   Structural and Functional Analysis of DDX41: a bispecific immune receptor for DNA and cyclic dinucleotide.   Sci Rep   2016 -10 -10   6   34756   27721487   10.1038/srep34756  
DNA material   pGL4-OX40Lp-700b (RDB14536)   47709   Yashiro T, Hara M, Ogawa H, Okumura K, Nishiyama C.   Critical Role of Transcription Factor PU.1 in the Function of the OX40L/TNFSF4 Promoter in Dendritic Cells.   Sci Rep   2016 -10 -06   6   34825   27708417   10.1038/srep34825  
DNA material   CSII-CMV-MCS-IRES2-Bsd (RDB04385)   47267   Minegishi Y, Sheng X, Yoshitake K, Sergeev Y, Iejima D, Shibagaki Y, Monma N, Ikeo K, Furuno M, Zhuang W, Liu Y, Rong W, Hattori S, Iwata T.   CCT2 Mutations Evoke Leber Congenital Amaurosis due to Chaperone Complex Instability.   Sci Rep   2016 -9 -20   6   33742   27645772   10.1038/srep33742  
Barley   オオムギ系統   47303   Takahagi K, Uehara-Yamaguchi Y, Yoshida T, Sakurai T, Shinozaki K, Mochida K, Saisho D.   Analysis of single nucleotide polymorphisms based on RNA sequencing data of diverse bio-geographical accessions in barley.   Sci Rep   2016 -9 -12   6   33199   27616653   10.1038/srep33199  
DNA material   316-SEC7-mRFP (RDB08663)   47224   Osberg C, Aksnes H, Ninzima S, Marie M, Arnesen T.   Microscopy-based Saccharomyces cerevisiae complementation model reveals functional conservation and redundancy of N-terminal acetyltransferases.   Sci Rep   2016 -8 -24   6   31627   27555049   10.1038/srep31627  
Yeast   BY23323, BY24051   47493   Murata W, Kinpara S, Kitahara N, Yamaguchi Y, Ogita A, Tanaka T, Fujita K.   Cytoskeletal impairment during isoamyl alcohol-induced cell elongation in budding yeast.   Sci Rep   2016 -8 -10   6   31127   27507042   10.1038/srep31127  
DNA material   Genome Network Project Human cDNA IRAL038I16 (HGY095408...   47266   Kataoka K, Nakamura C, Asahi T, Sawamura N.   Mitochondrial cereblon functions as a Lon-type protease.   Sci Rep   2016 -7 -15   6   29986   27417535   10.1038/srep29986  
Drosophila     47645   Yagi R, Mabuchi Y, Mizunami M, Tanaka NK.   Convergence of multimodal sensory pathways to the mushroom body calyx in Drosophila melanogaster.   Sci Rep   2016 -7 -11   6   29481   27404960   10.1038/srep29481  
Medaka   P53 E241X/E241X   47988   Ueno T, Suzuki H, Hiraishi M, Amano H, Fukuyama H, Sugimoto N.   In vivo Magnetic Resonance Microscopy and Hypothermic Anaesthesia of a Disease Model in Medaka.   Sci Rep   2016 -6 -3   6   27188   27251889   10.1038/srep27188  
Arabidopsis / Cultured plant cells, genes   pda07290, pda18567, pda02895, pda08364, pda02336...   36738   Francoz E, Ranocha P, Pernot C, Le Ru A, Pacquit V, Dunand C, Burlat V.   Complementarity of medium-throughput in situ RNA hybridization and tissue-specific transcriptomics: case study of Arabidopsis seed development kinetics.   Sci Rep   2016 -4 -21   6   24644   27095274   10.1038/srep24644  
Arabidopsis / Cultured plant cells, genes   pda07685   36739   Nakamoto T, Miyanokoshi M, Tanaka T, Wakasugi K.   Identification of a residue crucial for the angiostatic activity of human mini tryptophanyl-tRNA synthetase by focusing on its molecular evolution.   Sci Rep   2016 -4 -21   6   24750   27094087   10.1038/srep24750  
Paramecium   NBRP-Parameciumの62株   36507   Watanabe K, Nakao R, Fujishima M, Tachibana M, Shimizu T, Watarai M.   Ciliate Paramecium is a natural reservoir of Legionella pneumophila.   Sci Rep   2016 -4 -16   6   24322   27079173   10.1038/srep24322  
DNA material   pcDNA3.1_V5-NECAB3_WT (RDB14306); pcDNA3.1_V5-NEC...   47436   Nakaoka HJ, Hara T, Yoshino S, Kanamori A, Matsui Y, Shimamura T, Sato H, Murakami Y, Seiki M, Sakamoto T.   NECAB3 Promotes Activation of Hypoxia-inducible factor-1 during Normoxia and Enhances Tumourigenicity of Cancer Cells.   Sci Rep   2016 -3 -07   6   22784   26948053   10.1038/srep22784  
Silkworms   p50T   35978   Konogami T, Yang Y, Ogihara MH, Hikiba J, Kataoka H, Saito K.   Ligand-dependent responses of the silkworm prothoracicotropic hormone receptor, Torso, are maintained by unusual intermolecular disulfide bridges in the transmembrane region.   Sci Rep   2016 -3 -2   6   22437   26928300   10.1038/srep22437  
Medaka   HdrR-II1 (IB178)   36395   Zhang X, Guan G, Li M, Zhu F, Liu Q, Naruse K, Herpin A, Nagahama Y, Li J, Hong Y.   Autosomal gsdf acts as a male sex initiator in the fish medaka.   Sci Rep   2016 -1 -27   6   19738   26813267   10.1038/srep19738  
Medaka   olvas-eGFP   36423   Chakraborty T, Zhou LY, Chaudhari A, Iguchi T, Nagahama Y.   Dmy initiates masculinity by altering Gsdf/Sox9a2/Rspo1 expression in medaka (Oryzias latipes).   Sci Rep   2016 -1 -25   6   19480   26806354   10.1038/srep19480  
Medaka     36424   Zhou L, Charkraborty T, Zhou Q, Mohapatra S, Nagahama Y, Zhang Y.   Rspo1-activated signalling molecules are sufficient to induce ovarian differentiation in XY medaka (Oryzias latipes).   Sci Rep   2016 -1 -19   6   19543   26782368   10.1038/srep19543  
Silkworms     36419   Chen P, Tong XL, Fu MY, Hu H, Song JB, He SZ, Gai TT, Dai FY, Lu C.   Molecular mapping and characterization of the silkworm apodal mutant.   Sci Rep   2016 -1 -8   6   18956   26738847   10.1038/srep18956  
Human and Animal Cells   HeLa(RCB00007)   37885   Aini H, Itaka K, Fujisawa A, Uchida H, Uchida S, Fukushima S, Kataoka K, Saito T, Chung UI, Ohba S.   Messenger RNA delivery of a cartilage-anabolic transcription factor as a disease-modifying strategy for osteoarthritis treatment.   Sci Rep   2016   6   18743   26728350   10.1038/srep18743  
Mice   GFP-LC3#53(RBRC00806)   39512   Denaës T, Lodder J, Chobert MN, Ruiz I, Pawlotsky JM, Lotersztajn S, Teixeira-Clerc F.   The Cannabinoid Receptor 2 Protects Against Alcoholic Liver Disease Via a Macrophage Autophagy-Dependent Pathway.   Sci Rep   2016   6   28806   27346657   10.1038/srep28806  
Mice   tob-gene KO (B6)(RBRC01765)   46360   Didonna A, Cekanaviciute E, Oksenberg JR, Baranzini SE.   Immune cell-specific transcriptional profiling highlights distinct molecular pathways controlled by Tob1 upon experimental autoimmune encephalomyelitis.   Sci Rep   2016   6   31603   27546286   10.1038/srep31603  
Drosophila     40044   Fu CL, Wang XF, Cheng Q, Wang D, Hirose S, Liu QX.   The T-box transcription factor Midline regulates wing development by repressing wingless and hedgehog in Drosophila.   Sci Rep   2016   6   27981   27301278   10.1038/srep27981  
DNA material   pCAG-HIVgp (RDB04394); pCMV-VSV-G-RSV-Rev (RDB04393...   35936   Fukuda S, Nishida-Fukuda H, Nanba D, Nakashiro K, Nakayama H, Kubota H, Higashiyama S.   Reversible interconversion and maintenance of mammary epithelial cell characteristics by the ligand-regulated EGFR system.   Sci Rep   2016   6   20209   26831618   10.1038/srep20209  
General Microbes   JCM 1217, JCM 10602   48527   Garrido D, Ruiz-Moyano S, Kirmiz N, Davis JC, Totten SM, Lemay DG, Ugalde JA, German JB, Lebrilla CB, Mills DA   A novel gene cluster allows preferential utilization of fucosylated milk oligosaccharides in Bifidobacterium longum subsp. longum SC596.   Sci Rep   2016   6   35045   27756904   10.1038/srep35045  
Drosophila     35949   Han H, Fan J, Xiong Y, Wu W, Lu Y, Zhang L, Zhao Y.   Chi and dLMO function antagonistically on Notch signaling through directly regulation of fng transcription.   Sci Rep   2016   6   18937   26738424   10.1038/srep18937  
General Microbes   JCM 23201   48528   Hayashi S, Satoh Y, Ujihara T, Takata Y, Dairi T   Enhanced production of polyunsaturated fatty acids by enzyme engineering of tandem acyl carrier proteins.   Sci Rep   2016   6   35441   27752094   10.1038/srep35441  
DNA material   human MLC20 WT (RDB14158); human MLC20 T18A (RDB14159...   37887   Hirano M, Hirano K.   Myosin di-phosphorylation and peripheral actin bundle formation as initial events during endothelial barrier disruption.   Sci Rep   2016   6   20989   26863988   10.1038/srep20989  
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